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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs10059821 chr5:151617492 A/G FBXO38 chr5:147763498-147822399:+ 0.47 6.06 3.19E-9 Box Plot
BLCA rs10059821 chr5:151617492 A/G GEMIN5 chr5:154266976-154317769:- 0.47 6.28 9.36E-10 Box Plot
BLCA rs10059821 chr5:151617492 A/G MED7 chr5:156564423-156586030:- 0.6 6.53 2.05E-10 Box Plot
BLCA rs10059821 chr5:151617492 A/G NDUFA2 chr5:140018325-140027370:- 0.45 6.67 8.93E-11 Box Plot
BLCA rs10060188 chr5:161411559 C/T MED7 chr5:156564423-156586030:- -0.69 -6.4 4.48E-10 Box Plot
BLCA rs10060188 chr5:161411559 C/T NDUFA2 chr5:140018325-140027370:- -0.48 -6.06 3.23E-9 Box Plot
BLCA rs10063803 chr5:176667327 C/A LOC388955 chr2:63849182-63850159:- 0.54 11.45 2.72E-26 Box Plot
BLCA rs10068127 chr5:176631787 G/T LOC388955 chr2:63849182-63850159:- -0.66 -11.55 1.16E-26 Box Plot
BLCA rs10068400 chr5:140862666 A/G RAD50 chr5:131891711-131982036:+ 0.36 6.28 9.3E-10 Box Plot
BLCA rs10072499 chr5:176655237 T/G LOC388955 chr2:63849182-63850159:- -0.67 -12.78 2.16E-31 Box Plot
BLCA rs10080232 chr6:102876859 A/G ASCC3 chr6:100956070-101329248:- 0.63 6.97 1.37E-11 Box Plot
BLCA rs10080232 chr6:102876859 A/G ATG5 chr6:106493298-106773666:- 0.84 6.45 3.39E-10 Box Plot
BLCA rs10080232 chr6:102876859 A/G C6orf167 chr6:97590038-97731061:- 0.56 6.13 2.18E-9 Box Plot
BLCA rs10080232 chr6:102876859 A/G C6orf203 chr6:107349417-107372546:+ 0.76 6.37 5.55E-10 Box Plot
BLCA rs10080232 chr6:102876859 A/G RTN4IP1 chr6:107019846-107077362:- 0.81 6.15 1.99E-9 Box Plot